Category Archives: Salmon

Harper Estuary project gets started following years of discussion

Excavation started today on a $1.3-million project to reshape and restore Harper Estuary in South Kitsap.

Work began today on access roads for the Harper Estuary restoration project. Photo: Doris Small, WDFW
Heavy equipment begins work today to build access roads for the Harper Estuary restoration project.
Photo: Doris Small, WDFW

It is a project that I’ve been discussing since 2001, when former Harper resident Chuck Hower first introduced me to the idea, a concept that he had been promoting with state and federal officials. (See Kitsap Sun, Feb. 2, 2001.)

Orion Marine Contractors was the successful bidder among six companies that offered bids on the project to remove much of the fill material placed in and around the estuary. The amount of soil to be removed is estimated at more than 15,000 cubic yards, or enough to fill roughly 1,000 dump trucks.

“The work will restore (the estuary) to levels conducive to marsh establishment,” said Doris Small of the Washington Department of Fish and Wildlife. The project will recover a spit, reconnect saltwater to an impounded wetland and remove a bulkhead and old “relic” road that impounds the wetland, she said.

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Annual salmon watching is now on the fall agenda

Early and continuing rains in October have increased streamflows and brought coho and chum salmon into their spawning territories ahead of schedule this year.

Dickerson Creek
Dickerson Creek is undergoing restoration at the new bridge on Taylor Road. // Photo: Dunagan

I was out and about today, taking a look at some of the streams in Central Kitsap. I couldn’t pass up the chance to enjoy the sunny and warm weather, and I was pleased to encounter a lot of other folks doing the same thing. Adults of all ages, some with children, were out looking for the elusive salmon. That’s not something I ever saw 10 years ago while making my rounds to public salmon-viewing spots.

I believe the growing interest in salmon may result from ongoing promotions of salmon watching by governmental and volunteer organizations, as well as the news media. Why shouldn’t we go out to watch salmon swimming upstream and possibly, if one is lucky, catch a glimpse of spawning behaviors? After all, we live in one of the best areas for this enjoyable pastime.

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Death of female orca with young son raises worries about the future

It has been hard to take the news that J-28, a 23-year-old female killer whale named Polaris, is now missing and presumed dead — even though I knew this news has been coming since August. It now appears likely that her 11-month-old son J-54, named Dipper, will not survive either.

On Oct. 2, J-28, named Polaris, was photographed with an indentation behind her blow hole, a condition known as “peanut head.” Polaris has now been confirmed as dead, and her son is probably dead as well, researchers say.
On Oct. 2, J-28, named Polaris, was photographed with an indentation behind her blow hole, a condition known as “peanut head” and related to malnutrition. Her 11-month-old son, shown with her, also was struggling to survive. Polaris has now been confirmed as dead, and researchers say her son is probably dead as well.
Photo: Ken Balcomb, Center for Whale Research

I sadly reported on Polaris’ “super-gaunt” condition in Water Ways (Aug. 24) after talking to Ken Balcomb of the Center for Whale Research. Until recently, various whale-watching folks, including CWR researchers, have reported that Polaris was still alive. She was generally seen moving slowly and in poor shape, but at times she seemed to have more energy, raising hopes that she might recover. But the last sighting of Polaris was Oct. 19 in the Strait of Juan de Fuca.

During a press conference Friday, Ken announced the death of Polaris, as he spoke out to raise awareness about the plight of Puget Sound orcas.

Ken said Dipper’s sister and aunt were attempting to care for the young orphan, but no other lactating females have moved in to provide milk, so he likely will die if he is not already dead.

Ken read a personally penned obituary for Polaris, noting that she was popular with whale watchers, in part because she was easily identified by a nick in her dorsal fin. She acquired the distinctive mark when she was nine years old.

At the press conference, Ken talked about the most concerning problem facing the orcas: a shortage of chinook salmon, their primary prey. The food shortage is exacerbated when the whales burn fats stored in their blubber, causing the release of toxic chemicals from their blubber into their bloodstream. Chemicals can affect the immune and reproductive systems, as well as other hormonal systems.

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Amusing Monday: New art exhibit shows how glass can be like water

The similar properties of water and glass are explored in more than 50 pieces of artwork in an exhibit called “Into the Deep” at Tacoma’s Museum of Glass.

Undulation, kiln-cast crystal by Taliaferro Jones. The piece is 13 by 54 by 8 inches. Photo: Taliaferro Jones
“Undulation,” kiln-cast crystal by Taliaferro Jones. This piece is 13 by 54 by 8 inches.
Photo: Taliaferro Jones

The art captures the movements, shapes and colors of creatures and objects in the beautiful underwater world. For a closer look, click on the images on this page.

“By creating artwork inspired by the ocean, each artist has captured both the fragile beauty of the marine environment and the delicate nature of glass,” Katie Buckingham, exhibit curator, said in a statement on the exhibit’s webpage.

Persian Sea Forms, blown glass by Dale Chihuly. This piece is 67 by 120 inches. Photo: Terry Rishel
“Persian Sea Forms,” blown glass by Dale Chihuly. This piece is 67 by 120 inches. // Photo: Terry Rishel

Buckingham said she hopes visitors will not only enjoy the art but also feel inspired to celebrate and protect the natural environment. The 16 national and international artists featured in the exhibit include Alfredo Barbini, Dale Chihuly, Shayna Leib, Kelly O’Dell, Kait Rhoads, Raven Skyriver, and Hiroshi Yamano.

Fifteen of the pieces were produced in the workshop at the Museum of Glass, including some produced by apprentices.

"Tyee," hand-sculpted glass by Raven Skyriver. This piece is 21 by 32 by 7 inches. Photo: Kp Studios
“Tyee,” hand-sculpted glass by Raven Skyriver. This piece is 21 by 32 by 7 inches. // Photo: Kp Studios

The exhibit opened on Sept. 24 and will remain through September 2017. Visitors will be able to access information linked to each piece of art by using a cell phone and scanning the STQRY QR codes. Three virtual tours are available, one with scientific information, one about the creation of the sculptures and one on the artists. Bonnie Becker, a biologist at the University of Washington-Tacoma, wrote the scientific narrative.

"Red Polyp" blown glass with mixed hollow murrine woven with copper wire by Kait Rhoads. This piece is 45 by 49 by 19 inches. Photo: Kait Rhoads
“Red Polyp,” blown glass with mixed hollow murrine woven with copper wire by Kait Rhoads. This piece is 45 by 49 by 19 inches. // Photo: Kait Rhoads

A list of other exhibits can be found on the Museum of Glass webpage. Activities, including hands-on workshops and lectures, can be found on the Museum of Glass calendar. A separate webpage lists admission fees and hours.

Speaking of glass artwork, I am impressed with the intricate salmon sculpture with the glass salmon eggs used to create a kiosk at the east end of the new Bucklin Hill Bridge over the Clear Creek estuary in Silverdale.

Salmon and more than 200 glass eggs are part of a sculpture that makes up a new kiosk at the east end of the Bucklin Hill Bridge. Photo:
Salmon and more than 200 glass eggs are part of a sculpture that makes up a new kiosk at the end of the Bucklin Hill Bridge. // Photo: Larry Steagall, Kitsap Sun

Driving across the bridge, one can see the bright orange salmon eggs, more than 200 in all. A closer look reveals three salmon figurines in a swimming posture above the eggs.

“I do believe that when you drive along and you have artwork alongside the road, I think it lifts your spirits,” said Lisa Stirrett, the designer of the kiosk, in a story written by Christian Vosler for the Kitsap Sun.

Extensive floodplain restoration brings new hope to Clear Creek

A giant piece of a cedar log stands erect in a barren landscape north of Silverdale, where a new channel for Clear Creek stands ready to receive water.

An old cedar log was recovered during excavation for a new channel for Clear Creek. Photo: Dunagan
An old cedar log was recovered during excavation for a new channel for Clear Creek.
Photo: Christopher Dunagan

Well, maybe this channel won’t be entirely new. Designers working to restore this portion of Clear Creek studied old maps. They tried to align the new man-made channel to the meandering stream that existed 150 years ago, before farmers diverted the creek around their fields.

During excavation, workers uncovered buried gravel — remnants of the old streambed — along with chunks of cedar that had lain along the edge of the stream. Buried and cut off from oxygen, these pieces of wood survived for decades underground, while cattle grazed in the fields above.

Workers excavating for the new channel used their heavy equipment to pull out what remained of a great cedar log. They stood the log vertical and buried one end in the ground — a monument to the past and future of Clear Creek.

A restored Clear Creek floodplain (before plantings) north of Waaga Way in Central Kitsap. Photo: Kitsap County Public Works
A restored Clear Creek floodplain (before plantings) north of Waaga Way in Central Kitsap.
Photo: Kitsap County Public Works

Chris May, manager of Kitsap County’s stormwater program, showed me the new channel this week. He said it was rewarding to uncover some buried history and realize that the stream would be restored in roughly the same place.

“We found the old channel,” Chris told me, pointing to a deposit of gravel. “We are pretty confident that we got it right.”

This $3-million project has been conceived and designed as much more than a stream-restoration project. The elevations of the land around the stream have been carefully planned so that high flows will spill into side channels and backwater pools. That should reduce flooding in Silverdale and help stabilize the high and low flows seen in Clear Creek.

Before photo: This was the farmers field as it appeared before restoration. Photo: Kitsap County Public Works
Before photo: This was the farm field as it appeared before restoration. // Photo: Kitsap County Public Works

The engineers did not calculate the reduced frequency of flooding, but floodwater storage is calculated to be 18.4 acre-feet, the equivalent of a foot of water spread over 18.4 acres or 29,700 cubic yards or 6 million gallons.

In all, about 30,000 cubic yards of material have been removed across 21 acres, including the former Schold Farm on the west side of Silverdale Way and the Markwick property on the east side. Native wetland vegetation will be planted along the stream and in low areas throughout the property. Upland areas will be planted with natural forest vegetation.

The topsoil, which contained invasive plants such as reed canarygrass, was hauled away and buried beneath other excavated soils to form a big mound between the new floodplain and Highway 3. That area will be planted with a mixture of native trees.

Graphic showing area before restoration. Graphic: Kitsap County Public Works
Graphic showing area before restoration.
Graphic: Kitsap County Public Works

Plans call for removal of 1,500 feet of an existing road with upgrades to two aging culverts. Adding meanders to the straightened channel will create 500 feet of new streambed that should be suitable for salmon spawning.

Plans call for adding 334 pieces large woody debris, such as logs and root wads to the stream. Some of that wood will be formed into structures and engineered logjams to help form pools and gravel bars.

Graphic showing area after restoration. Graphic: Kitsap County Public Works
Graphic showing area after restoration. Notice stream meanders near beaver pond habitat
Graphic: Kitsap County Public Works

“This will be one of the first streams to meet the Fox and Bolton numbers,” Chris told me, referring to studies by Martin Fox and Susan Bolton of the University of Washington. The two researchers studied natural streams and calculated the amount of woody debris of various kinds needed to simulate natural conditions, all based on the size of a stream. (Review North American Journal of Fisheries Management.)

The elevations on the property were also designed so that high areas on opposite sides of the stream would be in close proximity in several locations.

“Beaver will pick that spot,” Chris said, pointing to one location where the stream channel was squeezed by elevated banks on each side. “We want to encourage beaver to come in here.”

Beaver ponds will increase the floodwater storage capacity of the new floodplain and provide important habitat for coho salmon, which spend a year in freshwater and need places to withstand both high and low flows. Because the county owns the flooded property, there won’t be any complaints about damage from beavers, Chris noted.

Aerial photo showing project area with Silverdale in the background, Silverdale Way to the left and Highway 3 to the right. Photo: Kitsap County Public Works
Aerial photo showing project area with Silverdale in the background, Silverdale Way to the left and Highway 3 to the right. // Photo: Kitsap County Public Works

Clear Creek Trail (PDF 390 kb), which begins on the shore of Dyes Inlet, will be routed along the higher elevations as the trail winds through the property. Three new bridges will provide vantage points to watch salmon after vegetation obscures other viewing areas from the trail. Viewing platforms, as seen along other parts of Clear Creek Trail, were not included in this project but could be subject to further discussions.

Count me among the many people — experts, volunteers and users of Clear Creek Trail — who are eager to see how nature responds when water (now diverted) returns to the new stream channel. For decades, the lack of good habitat has constrained the salmon population in Clear Creek. The stream still has problems related to its highly developed watershed. But now a series of restoration projects is providing hope for increased coho and chum salmon and possibly steelhead trout as well as numerous other aquatic species.

In a story in the Kitsap Sun, Reporter Tristan Baurick described work this week on the Markwick property, where fish were removed in preparation for final channel excavation.

Here are some details (including photos) of various Clear Creek projects, as described in the state’s Habitat Work Schedule for restoration projects:

Washington Department of Ecology provided $2 million for the project. Kitsap County’s stormwater and roads programs each provided $500,000.

A difference between chum and coho salmon may be in their blood

On the outside, chum and coho salmon don’t seem all that different from one another, not when you consider the variety of fish in Puget Sound — from herring to halibut along with dozens of other odd-looking creatures (EoPS).

But we know that if you place coho in stormwater taken from a heavily traveled roadway, the coho are likely to die within hours. But if you do the same thing with chum, these hardy fish will barely notice the difference.

In this photo taken two years ago, Jenifer McIntyre describes her discoveries about rain gardens at the Washington Stormwater Center in Puyallup. Photo: Meegan Reid, Kitsap Sun
In this photo taken two years ago, Jenifer McIntyre describes her discoveries about rain gardens at the Washington Stormwater Center in Puyallup.
Photo: Meegan M. Reid, Kitsap Sun

Researchers began to observe the varying effects of pollution on different species of salmon years ago. In 2006, I reported on studies by researcher Nat Scholz of the National Marine Fisheries Service, who discovered that coho would swim into Seattle’s heavily polluted creeks to spawn, but they wouldn’t get very far. Within hours, they would become disoriented, then keel over and die. (Kitsap Sun, June 10, 2006)

Later, Jenifer McIntyre, a researcher with Washington State University, collaborated with Scholz to refine the studies, exposing adult coho and later young coho to stormwater under controlled conditions. Much of that work was done at the Suquamish Tribe’s Grover’s Creek Hatchery in North Kitsap. The researchers also measured the physiological effects of pollution on zebrafish embryos during their early stages of development.

Working at the Washington Stormwater Center in Puyallup, Jen made a remarkable discovery that has dramatically changed people’s thinking about stormwater treatment. She found that if you run the most heavily polluted stormwater through a soil medium containing compost, the water will no longer have a noticeable effect on the sensitive coho. Rain gardens really do work.

Jen’s findings and related stormwater issues were described in a story I wrote two years ago for the Kitsap Sun, “Stormwater solutions key in fight for Puget Sound.” The story is part of a two-year project we called “Taking the Pulse of Puget Sound.”

Now, Jen, who recently joined the faculty of WSU, is beginning a new phase of her research, probing deeper into the physiological responses of coho salmon when exposed to polluted stormwater. She told me that the varying responses of coho and chum offer clues about where to look for problems.

“It is very interesting,” she said. “As biologists, we understand that there is variability among species. But we would expect, at least among salmon, that things would be pretty much the same.”

Researchers in Japan have discovered that different kinds of fish have different subunits in their hemoglobin, which are the proteins in red blood cells that carry oxygen to the vital organs. Since coho and other salmon may have different forms of hemoglobin, oxygen transport in the blood is a good place to start this investigation, she said.

From there, the issues of blood chemistry get a little technical, but the ability of red blood cells to carry oxygen can depend not only on the form of hemoglobin but also on the pH (acidity) of the blood, she said, and that can be altered by drugs and other chemicals.

Another thing that researchers may be seeing is “disseminated intravascular coagulation,” a condition that results from clotting in the lining of the capillaries. DIC can reduce or block blood flow where it is most needed and eventually cause organ damage. That’s an area for more research, Jen said, noting that these investigations are moving forward in collaboration with researchers at NMFS and the U.S. Fish and Wildlife Service.

Meanwhile, Jen is working with chemists at the University of Washington’s Center for Urban Waters in Tacoma to figure out which substances — out of hundreds of chemicals found in stormwater — could be causing these deadly effects on fish.

If isolating the dangerous compounds proves too difficult, researchers might be able to start with the original toxic sources, perhaps exposing fish to chemicals found in tires, oil, antifreeze and so on, Jen said. For those effects, it might be good to begin the investigation with the well-studied zebrafish embryos, which are transparent and can be observed closely throughout their embryonic development.

Needless to say, this is a field of intense interest. If researchers can discover what is killing coho, they might begin to understand why the recovery of chinook salmon in Puget Sound has been so slow. Chinook, which could be added to Jen’s studies, are listed as a threatened species under the Endangered Species Act and are the preferred prey of Puget Sound’s killer whales, which are listed as endangered.

Two recent articles discussed the relative hardiness of the chum compared to coho salmon:

One orca is missing and presumed dead; another reported as ‘super-gaunt’

I have some bleak news to share about our Southern Resident killer whales, which normally frequent Puget Sound at this time of year.

J-14 seen earlier this year in Puget Sound. Photo: Center for Whale Research
J-14 seen earlier this year in Puget Sound.
Photo: Dave Ellifrit, Center for Whale Research,
taken under federal permits NMFS 15569/ DFO SARA 388

J-14, a 42-year-old female named Samish, has gone missing and is presumed dead, while J-28, a 23-year-old orca mom named Polaris, may be living out her final days.

“Things are shaping up to be pretty bad,” said Ken Balcomb of the Center for Whale Research, who keeps tabs on the orca population. “J-28 is looking super-gaunt, and I would say she is within days of her death.”

The saddest part of my conversation with Ken this morning was to hear him say that Polaris’ 7-month-old calf would become an orphan and probably will not survive without his mother. That’s the typical outcome for an orphan of that age, Ken said, although there is a chance that the young male will be adopted by his grandmother.

The calf, J-54, is still nursing, but he is close to weaning, Ken noted. He is the newest calf born into the three Southern Resident pods and is part of the “baby boom” of nine orcas born between December 2014 and December 2015. So far, only one of those calves, J-55, has died.

After my conversation with Ken, the Center for Whale Research posted a news release about the death of Samish. Orca observers on the water have known that she was missing for some time now.

As of today, J pod was on its way out through the Strait of Juan de Fuca, no doubt searching for food. The chinook salmon run has been very low this summer.

“Historically, at this time of year, we would see nice little bunches (of orcas) swimming back and forth in front of the house,” said Ken, who lives on the west side of San Juan Island. But this year, the whales have broken up into small family groups and are traveling around in seemingly random patterns, presumably in search of whatever salmon they can find.

“Even the fishermen aren’t getting much this year,” Ken said.

To gauge a killer whale’s condition, researchers consider the overall shape of its body. Without adequate fish — primarily chinook salmon — an orca grows thinner as the body fat declines. As conditions grow worse, a depression develops behind the blow hole. This sunken condition — which Polaris has developed — is called “peanut head.” So far, none of the other animals have been observed in such a dire condition.

I’ve often been told by medical experts that when a killer whale loses weight it can be a sign of a major problem, such as a disease that makes them incapable of hunting to their normal ability. But a shortage of food can exacerbate the condition.

“We have been telling the government for years that salmon recovery is essential for whale recovery,” Ken said.

He blames the salmon decline on longtime mismanagement of wild salmon stocks — including damage to habitat, over-fishing and excess hatchery stocks in both Canada and the U.S. One of the quickest ways to increase the chinook population for these whales is to take out the Snake River dams, he said.

Rebuilding salmon runs on the Elwha River will help, Ken said, but the number of fish is small compared to the potential of the Snake River, which flows into the Columbia and produces salmon that can be caught in the ocean.

“I’m trying to get the marine mammal people to talk to the salmon people,” Ken said. “Fish have been a political problem for a long time, and we are not solving the salmon issue.”

Money spent on law enforcement to make sure whale watchers don’t get too close to the orcas would be better spent on education — specifically on educating lawmakers about the needs of salmon and killer whales, he quipped.

As of July 1 — the date of the annual orca census — the population of the three Southern Resident pods stood at 83. That’s the number that will be reported to the federal government. Since then, Samish has gone missing, so the ongoing count falls to 82, pending the status of Polaris and her son.

Samish was considered part of the J-2 (“Granny”) family group. Her living offspring are Hy’shqa (J-37), Suttles (J-40) and Se-Yi’-Chn (J-45). Samish was the grandmother to Hy-Shqa’s 4-year-old son T’ilem I’nges.

Polaris is the first offspring of Princess Angeline (J-17), who is still living. Her first offspring, a female named Star (J-46), is now 7 years old. J-54 is her second offspring.

Looking backward, then forward on actions in Skokomish watershed

Through the years, I’ve written a lot about the Skokomish River, which begins in the Olympic Mountains and flows into the south end of Hood Canal. The wide, productive estuary might be described as the elbow of this long, narrow waterway that bends up toward Belfair.

Cover

I’ve heard it said that Puget Sound cannot be restored to health without a healthy Hood Canal, and Hood Canal cannot be restored to health without a healthy Skokomish River. Whether that is true remains to be seen, but I have no doubt that the Skokomish River watershed is coming out of a dark period of abuse with hope of becoming one of the most productive streams in the region.

Much of the credit for the transformation goes to a group of men and women from a variety of agencies, occupations and ways of life who came together with an understanding of the historic value of the Skokomish River and a vision for what the river could become again. This was the Skokomish Watershed Action Team, or SWAT, which celebrated its 10th anniversary last year.

helicopter

To be sure, it was basically loads of money that began to transform the abused Skokomish River watershed to a much more productive system. But the people in charge of the federal, state, local and private dollars were able to see the Skokomish as a worthy cause, thanks to the groundwork laid by the SWAT. Disappointments have been few, as one project after another brings this long lost river back to life.

Yes, I have written a lot about the Skokomish River, its history and its future. That’s why I was glad to see the 10-year update to the Skokomish Watershed Action Plan (download, PDF 113 mb). The document contains an extensive account of the projects completed and the milestones passed through the years. Whether you are intimately involved in the watershed or just want to know what the heck I’m talking about, take a look at the report released this week.

Logjam soon after installation in 2010. Photo: U.S. Forest Service
Logjam soon after installation in 2010.
Photo: U.S. Forest Service

Since 2005, nearly 50 restoration projects were completed — from removal of old logging roads high in the mountains to the re-establishment of tidal channels in the lower estuary. Salmon are being reintroduced to the North Fork of the Skokomish River, including the dammed-up Lake Cushman, thanks to a legal settlement between Tacoma and the Skokomish Tribe.

After establishment, a deep pool forms behind the logjam. Photo: U.S. Forest Service
Later, a deep pool forms behind the jam.
Photo: U.S. Forest Service

About 12 miles upstream in the South Fork of the Skokomish, a series of 30 logjams were installed and almost immediately began to restore the channel to a more natural habitat for fish and other aquatic creatures. This area was part of a four-mile stretch that was heavily logged in the 1950s for a reservoir that never happened.

Once the logjams were in place, the area began to store massive loads of sediment, which always created problems as they washed downstream into the lower river. The river’s characteristic problem of spreading out and slowing down was reversed, as width-to-depth ratios decreased and the average depth in the middle of the river increased by two feet. The number of pools deeper than five feet doubled from three to six, and the piles of wood grew larger by capturing logs floating downstream.

The new report also lays out plans for the watershed in the coming years, including projects identified in a major study by the Army Corps of Engineers. A Corps proposal to fund $20 million in restoration projects is now before Congress, as I described in Water Ways in April and June. Other projects have been proposed for separate funding, as outlined in the new report.

Hospitality for salmon coming with restoration of Big Beef Creek

Big Beef Creek, which flows into Hood Canal near Seabeck, will soon undergo a major wetland renovation that should improve the survival of coho salmon and steelhead trout.

Other work, which started last year, involves placing large woody debris in the stream to create deep pools for salmon to cool off and rest before continuing their migration. The wood also will help to form new spawning areas for coho, fall chum and the threatened summer chum of Hood Canal.

Large woody debris placed in Big Beef Creek last summer has begun to form pools where salmon can escape the strong current. Photo: Hood Canal Salmon Enhancement Group
Large woody debris placed in Big Beef Creek last summer has begun to form pools where salmon can escape the strong current.
Photo: Hood Canal Salmon Enhancement Group

Big Beef Creek is an unusual stream, one with a personal connection for me. In the late 1970s, I lived at Lake Symington, a man-made lake built years before by impounding Big Beef Creek. A few years ago, my wife and I bought a home with a tiny tributary of Big Beef Creek running through the property.

To get a lay of the land, I ventured along the stream and through the watershed in 1999, meeting many people along the way and gaining a new respect for Big Beef Creek — known as the longest stream contained entirely within Kitsap County. Check out my story for the Kitsap Sun called “The Watershed.” Much later, I wrote a Water Ways blog post about the creek beginning with, “It is the best of streams; it is the worst of streams,” with apologies to Charles Dickens.

Today, the $1.2 million habitat transformation is taking place in the lower portion of the stream, just upstream from the estuary where people go to watch bald eagles soar. (Check out this week’s “Amusing Monday.”) The project is on property owned by the University of Washington’s Big Beef Creek Research Station. Work is under the direction of Hood Canal Salmon Enhancement Group, a division of Pacific Northwest Salmon Center.

Site work will expand an 11-acre wetlands by five acres and reconnect the wetland complex to the stream channel. Coho, which remain in freshwater for the first year of life, will find a safe place to stay during the low flows of summer and the fierce floods of winter.

Officials agreed to close the well, so a relocated road will not be needed. Note the off-stream channels and the ability for the stream to change course. Map: Hood Canal Salmon Enhancement Group
Officials have agreed to close the well, so a relocated road will not be needed. Note the off-stream channels and ability of the stream to change course within the floodplain.
Map: Hood Canal Salmon Enhancement Group

“Coho rely on streams with complex habitat, including pools and shade with good water quality,” said Mendy Harlow, executive director of the salmon center. “In this project, we are focusing on the lower one mile of stream.”

Removing an access road along with 1,600 cubic yards of fill will restore two of the five acres of wetlands and open up the floodplain. The other two acres come from excavating some 4,500 cubic yards of fill from an elevated area where old storage buildings were removed last year.

In last year’s work, 10 man-made logjams were created where excavators could reach the creek. At the end of this month, helicopters will be used to place another 13 logjams in sections of the stream that could not be reached by land.

In a coordinated fashion, the helicopters also will be used to place logjams in Little Anderson Creek, which drains into Hood Canal just north of Big Beef. Little Anderson Creek, which originates near Newberry Hill Heritage Park, previously received several loads of wood in 2006 and again in 2009.

Both Big Beef and Little Anderson are part of an “intensively monitored watershed” program, in which experts are attempting to measure the extent to which habitat improvements increase salmon populations. It is not an easy thing to figure out, since salmon runs vary naturally from year to year. Still, over time, the improved spawning and rearing conditions should be measurable.

Other restoration work is planned on Seabeck Creek, while Stavis Creek will remain unchanged as the “control stream” for the Hood Canal complex of intensively monitored streams.

Fish traps placed in the streams monitor the out-migration of young salmon smolts, while a permanent fish trap at Big Beef Creek is used to count both smolts and returning adults. For each stream, biologists also count the number of redds — mounds of gravel where salmon have laid their eggs — to determine if conditions are improving.

Big Beef Creek logjams
Adding wood to Big Beef Creek results in greater stream complexity, offering salmon options for food, spawning and other needs.
Photo: Hood Canal Salmon Enhancement Group

The improved wetlands and floodplain on Big Beef Creek will allow the stream to move among several historical stream channels as sediment loads build and decline over time. Strategically placed wood will provide complexity wherever the stream chooses to go, according to Mendy, who has been working toward this project since 2007.

“I’m really excited about it and look forward to the changes,” she said. “The phase of work going forward this summer is the important phase.”

Sarah Heerhartz, habitat program manager for Hood Canal Salmon Enhancement Group, said improving the wetlands will not only help fish but also birds that favor wetlands. The stream will have room to move and spread out, she said, and some of the sediment from upstream sources will drop out before reaching the estuary.

“The floodplain is going to be a big boost for coho fry to smolt survival, because that will open up a lot of rearing habitat for juvenile coho,” Sarah told reporter Ed Friedrich in a story written for the Kitsap Sun.

The stream restoration is not expected to affect work at the UW research station, which continues to play a role in salmon studies, including efforts to improve hatchery conditions. In 1999, I wrote about the efforts to restore a run of summer chum on Big Beef Creek. Take a look at “Reviving a salmon run.” Unfortunately, the resuscitation effort has not been entirely successful, but there are new hopes that this summer’s stream repairs will give a boost to the summer chum as well as the coho.

Invasive species hitching a ride into Puget Sound

We hear about the “balance of nature,” but it’s not something that we can truly understand until the balance is thrown out of whack by something like climate change or invasive species.

Until I began a recent reporting project for Puget Sound Institute, I never realized that San Francisco Bay was such a hotbed of invasive species. Beginning with the California Gold Rush, ships began moving in and out of the bay in unbelievable numbers, arriving from ports all around the world. Now, more than 200 non-native species are making their permanent home in the bay — including some species that have thoroughly altered the local ecosystem.

So far, we have been lucky in Puget Sound. Experts say we have about 75 firmly established non-native species, yet none of them have created the widespread damage caused in San Francisco Bay by European green crabs and Asian clams or in the Great Lakes by zebra mussels. The video on this page does a good job of telling the Great Lakes story, which has been repeated all over the world.

Once people in Washington state realized how disruptive invasive species can be, the struggle was on to protect Puget Sound from alien invaders — particularly those found in San Francisco Bay, which is just a short hop away on the world scale. My series of stories talks about concerns for Puget Sound and the efforts to control a possible invasion.

Three weeks ago in Water Ways, I described legislation that would reduce state and federal controls over invasive species. See “Bill could increase risks of alien species invasions in Puget Sound waters.”

On the East Coast, where they are native, striped bass are one of the most popular sport fish. Here, Angela Anning of Connecticut shows off her impressive striper. On the West Coast, striped bass could be considered an invasive species. Photo: NOAA
On the East Coast, where they are native, striped bass are one of the most popular sport fish. Here, Angela Anning of Connecticut shows off her impressive striper. On the West Coast, striped bass could be considered an invasive species.
Photo: NOAA

Invasive species range in size from microscopic viruses to four-foot-long striped bass. In California, the striped bass became a prized sport fish after it was intentionally introduced in 1879. But over the past decade concerns have grown for their effects on the salmon population. The jury is still out on whether high numbers of stripers should be sustained for anglers or the population should be fished down rapidly to save salmon and other species. Check out these stories:

Meanwhile, striped bass have been moving up the West Coast, possibly because of warmer waters due to climate change. A few years ago, a 55-pounder was caught in the Columbia River, and I’ve heard rumors that they have been seen in the Strait of Juan de Fuca.

On the small side, I report on a tiny crustacean, an invasive copepod that has almost entirely displaced native copepods in Samish Bay in northern Puget Sound. Copepods are important prey for small fish, including herring, which feed the larger salmon. The invasive copepods are smaller and more difficult for fish to see, which could have a cascading effect on the entire food web.

Invasive copepod Oithona davisae under magnification Photo: Jeff Cordell, University of Washington
Invasive copepod Oithona davisae
Photo: Jeff Cordell, UW

A major concern for Puget Sound biologists is the European green crab, which could move into Puget Sound from San Francisco Bay in ballast water or with warm ocean currents during an El Niño year, like the one just past. As I describe in the new series, a major program involving citizen science volunteers is ongoing in a search to find the first green crabs before they gain a foothold.

Pacific oysters, another non-native species, were intentionally brought to the Northwest from Japan in the early 1900s to replace the native Olympia oyster, which had been decimated by poor water quality. Pacific oysters soon became a mainstay of the shellfish industry in the Puget Sound region and are now growing thick in numerous areas.

European green crab Photo: Washington Sea Grant
European green crab
Photo: Gregory C. Jensen, UW

Similar introductions of Pacific oysters occurred in California beginning more than 100 years ago, but for some reason the oyster populations never took hold, according to a report in the publication California Fish and Game (PDF 1.7 mb). Finally, in the early 2000s, the invasion began to take off.

“It remains unclear why there should be a successful invasion now, given the failure of previous attempts to deliberately introduce the species both locally and throughout California…,” the report says.

“If populations in Southern California waters do continue to expand and grow, as they have in other areas where they have invaded, it will undoubtedly bring changes to the way our estuarine intertidal habitats function as well as in the way we must manage them.

Pacific oyster Photo: Washington Sea Grant
Pacific oyster
Photo: Washington Sea Grant

“Because Pacific oysters rapidly reach large sizes, they could pose problems related to fouling of maritime equipment, infrastructure, and vessels,” the report continues. “Pacific oysters stand out as one of the most transformative invaders of marine ecosystems.”

As Washington state takes steps to keep alien species from invading Puget Sound from California, California officials may adopt similar measures to block invaders from coming into that state.

Please take a look at this package of stories I wrote for Puget Sound Institute, with editing by Jeff Rice and design by Kris Symer: